SRR1780894_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780894_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	301071
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	25566	8.49168468567215	No Hit

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGAACAT	35	0.0012542934	40.0	1
CGGTGGT	90	1.03682396E-10	38.888885	46
GCGCTGG	45	9.185725E-5	38.888885	15
GCCGTAT	65	4.8541915E-7	37.692307	54
TGGTCGC	85	2.566594E-9	37.058823	49
CGGGGTT	40	0.0024166077	35.0	35
GTGCGCC	40	0.0024166077	35.0	34
CGCTTAG	40	0.0024166077	35.0	19
ATCTCGG	90	4.485628E-9	34.999996	42
GTAGATC	90	4.485628E-9	34.999996	38
CTCGGTG	90	4.485628E-9	34.999996	44
GATCTCG	90	4.485628E-9	34.999996	41
TCGGTGG	90	4.485628E-9	34.999996	45
GTCGCCG	95	7.605195E-9	33.157898	51
CGTATCA	75	1.4869947E-6	32.666668	56
CCGGAAA	55	2.9882466E-4	31.81818	18
TAGATCT	100	1.2538294E-8	31.499998	39
GATCGGG	45	0.004303461	31.111109	32
TGGCGCA	45	0.004303461	31.111109	54
CCCAACG	45	0.004303461	31.111109	21