SRR1780854_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780854_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	259223
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	31367	12.100392326298207	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGAACCG	15	0.0022232719	69.99749	31
GGCGGTC	15	0.0022232719	69.99749	44
GGTCTCG	35	2.0834023E-5	49.99821	41
GCCGTAT	50	6.168921E-8	49.0077	54
GTCTCGG	30	5.8719714E-4	46.664993	42
TGGTCGC	60	4.9167284E-9	46.664993	49
TCGGTGG	85	1.8189894E-12	45.292496	45
CGCCGTA	60	2.586239E-7	40.83975	53
GGTGACG	35	0.0012530016	40.006287	54
GCATGCC	35	0.0012541912	39.99857	11
GTCGCCG	80	1.4169927E-9	39.373592	51
TCGCCGT	55	6.671955E-6	38.187817	52
TCTCGGT	110	0.0	38.18045	43
ATCTCGG	75	3.5252015E-8	37.331997	42
CTCGGTG	105	1.2732926E-11	36.665356	44
GTGACGG	40	0.0024141276	35.0055	55
CTTTCTA	40	0.002416414	34.99875	30
GATCTCG	80	6.2213076E-8	34.99875	41
GCTTCTA	65	2.0982912E-5	32.306534	1
CTTGAGG	65	2.0982912E-5	32.306534	45