SRR1780852_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780852_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	261908
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	32280	12.324938528032744	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCACAA	45	1.681532E-6	46.663612	50
TGCCGAG	40	4.5868197E-5	43.747135	57
TTGTACG	35	0.0012532206	40.00502	9
GTTGTAC	35	0.0012532206	40.00502	8
TGTAACG	35	0.0012532206	40.00502	12
GTAACGA	35	0.0012532206	40.00502	13
TTTCGTC	35	0.001254398	39.997383	28
CGAGTTC	50	1.7056268E-4	35.004395	60
TGGTCGC	50	1.707543E-4	34.99771	49
TCGCCGT	40	0.0024168119	34.997707	52
CCTCACG	65	2.0960595E-5	32.311745	59
CGGGTAG	55	2.984993E-4	31.822172	10
CCGAGTT	55	2.984993E-4	31.822172	59
GCGGGTA	55	2.984993E-4	31.822172	9
GTAGATC	55	2.9883397E-4	31.8161	38
TTTGCAT	45	0.004299806	31.115015	17
TTGCATT	45	0.004299806	31.115015	18
GCCGTAT	45	0.0043038265	31.109076	54
ACTACCG	60	4.9758225E-4	29.164757	70
TGCTAGC	50	0.007195954	28.003515	11