SRR1780811_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780811_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	59008
Sequences flagged as poor quality	0
Sequence length	76
%GC	91

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	40355	68.38903199566161	No Hit
CTTATACACATCTGACGCTGCCGACGAGAGGCTGCGTGTAGATCTCGGTG	617	1.0456209327548807	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	127	0.21522505422993493	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	81	0.13726952277657267	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	77	0.13049078091106292	No Hit
TCTTATACACATCTGACGCTGCCGACGAGAGGCTGCGTGTAGATCTCGGT	76	0.12879609544468548	No Hit
GGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	75	0.12710140997830802	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	71	0.12032266811279828	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	68	0.11523861171366594	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGG	68	0.11523861171366594	No Hit
GGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGG	60	0.10168112798264642	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGTAT	155	0.0	56.410606	54
CCGTATC	150	0.0	55.959324	55
TGGTCGC	160	0.0	54.69413	49
GTCGCCG	160	0.0	54.69413	51
CGCCGTA	160	0.0	54.69413	53
GGTCGCC	160	0.0	54.69413	50
AAAAAGG	90	0.0	54.4049	70
CGTATCA	155	0.0	54.154182	56
GTATCAT	150	0.0	53.673172	57
ATCATTA	150	0.0	53.673172	59
TCATTAA	150	0.0	53.673172	60
GTGGTCG	170	0.0	53.535896	48
TCGCCGT	165	0.0	53.036728	52
TATCATT	160	0.0	52.506363	58
AAAGGGG	20	0.00693947	52.461864	69
GGTGGTC	175	0.0	52.006298	47
ATCTCGG	170	0.0	51.47682	42
TCTCGGT	170	0.0	51.47682	43
GATCTCG	170	0.0	51.47682	41
CTCGGTG	170	0.0	51.47682	44