SRR1780807_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780807_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	69963
Sequences flagged as poor quality	0
Sequence length	76
%GC	91

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	50976	72.86136958106427	No Hit
CTTATACACATCTGACGCTGCCGACGAAAATTTGCGTGTAGATCTCGGTG	771	1.1020110629904378	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	123	0.17580721238368852	No Hit
TCTTATACACATCTGACGCTGCCGACGAAAATTTGCGTGTAGATCTCGGT	95	0.13578605834512528	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	78	0.1114875005359976	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	78	0.1114875005359976	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	75	0.10719951974615154	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GAGTGTG	15	0.0022133668	70.02218	34
AGTGTGG	15	0.0022133668	70.02218	35
GGAGTGT	15	0.0022133668	70.02218	33
GTCTGGC	15	0.002219659	69.97212	10
GCGTCTG	20	7.892315E-5	69.97212	8
GTGGCGC	20	7.892315E-5	69.97212	12
TGGCGCT	25	2.8198428E-6	69.97212	13
CGTCTGG	20	7.892315E-5	69.97212	9
CCGGCGG	15	0.002219659	69.97212	21
AAAGGGG	25	2.3801727E-4	55.9777	70
TGGTCGC	180	0.0	54.461693	49
GTCGCCG	180	0.0	54.461693	51
GGTCGCC	180	0.0	54.461693	50
TCGGTGG	175	0.0	54.017105	45
TCTCGGT	175	0.0	54.017105	43
CTCGGTG	175	0.0	54.017105	44
TCGCCGT	170	0.0	53.546368	52
GTATCAT	165	0.0	53.047104	57
CCGTATC	165	0.0	53.047104	55
CGTATCA	165	0.0	53.047104	56