SRR1780795_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780795_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	47769
Sequences flagged as poor quality	0
Sequence length	76
%GC	92

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	34076	71.33496619146308	No Hit
CTTATACACATCTGACGCTGCCGACGAGCCACGTCGTGTAGATCTCGGTG	184	0.38518704599217063	No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	74	0.1549121815403295	No Hit
GGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	66	0.1381649186711047	No Hit
GGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	61	0.12769787937783916	No Hit
GGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	51	0.10676380079130818	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	50	0.10467039293265508	No Hit
GGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	48	0.10048357721534887	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCGCGT	15	0.0022056557	70.04926	5
ACGCGGC	15	0.0022056557	70.04926	6
CGCGTCT	20	7.8237834E-5	70.04926	7
GGCGCTG	20	7.8645695E-5	69.975914	14
TGCCGGC	15	0.0022148534	69.975914	19
TCTGGCG	15	0.0022148534	69.975914	11
GTCTGGC	15	0.0022148534	69.975914	10
CTGGCGC	15	0.0022148534	69.975914	12
GCGTCTG	20	7.8645695E-5	69.975914	8
CTGCCGG	15	0.0022148534	69.975914	18
CGTCTGG	20	7.8645695E-5	69.975914	9
CGCCGTA	45	3.6925485E-10	62.266014	53
CCGTATC	40	1.0326403E-8	61.293106	55
CATTAAA	40	1.0326403E-8	61.293106	61
TCGCCGT	40	1.0326403E-8	61.293106	52
GCCGTAT	40	1.0326403E-8	61.293106	54
GTATCAT	35	2.9013427E-7	60.042225	57
CGTATCA	35	2.9013427E-7	60.042225	56
TATCATT	35	2.9013427E-7	60.042225	58
ATCATTA	35	2.9013427E-7	60.042225	59