SRR1780791_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780791_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	268763
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	12732	4.737259220949312	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGTAT	50	1.4551915E-11	62.992126	54
GTCGCCG	45	2.6959242E-8	54.437645	51
CAGGTAC	20	0.0069394824	52.512978	1
CGCTGTA	20	0.006949705	52.49344	26
GATTGAC	20	0.006949705	52.49344	56
CGGTCTA	20	0.006949705	52.49344	7
CGGTGGT	70	3.8198777E-10	45.011127	46
CGTATCA	70	3.8380676E-10	44.994377	56
TCGGTGG	55	1.3050521E-7	44.55647	45
TCGCCGT	55	1.308872E-7	44.53989	52
CGCCGTA	55	1.308872E-7	44.53989	53
TCTCGGT	65	9.95351E-9	43.087574	43
AGATCTC	65	9.969881E-9	43.079556	40
CTCGGTG	65	4.8422044E-7	37.701626	44
GATCTCG	65	4.84928E-7	37.69461	41
ATCTCGG	65	4.856356E-7	37.6876	42
TGGTCGC	70	8.6502223E-7	35.008656	49
GTACCTA	40	0.0024176291	34.995625	6
ATTTCGG	40	0.0024176291	34.995625	53
GTAGATC	95	7.579729E-9	33.166096	38