SRR1780778_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780778_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	212712
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	23476	11.036518861183197	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCGTCAC	25	2.3848884E-4	56.008095	13
CGTCACC	25	2.3848884E-4	56.008095	14
CCGTCAT	20	0.006946779	52.495235	21
TCTGTGA	20	0.0069532427	52.482895	34
ACTCCCG	30	5.877975E-4	46.651466	50
ACTGCCC	35	0.0012525719	40.00578	36
CTCCCGA	35	0.0012540218	39.996372	51
AGGTGCA	35	0.0012540218	39.996372	51
TCGGGCC	40	0.0024077399	35.021526	41
TAACGAC	40	0.0024105215	35.01329	54
TACATGG	40	0.0024133055	35.005054	17
AGCTCGT	55	2.9827846E-4	31.822779	11
TAGCTCG	55	2.9869043E-4	31.815296	10
TGCGAAG	45	0.004292658	31.122927	38
CCCGATT	45	0.004292658	31.122927	53
CCCGTCA	45	0.004297604	31.115606	12
CGTACAC	45	0.004297604	31.115606	1
ACACTTC	45	0.004297604	31.115606	43
CGAGAAT	45	0.004297604	31.115606	14
TTGATAA	45	0.0043025543	31.10829	9