SRR1780770_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780770_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	756795
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGCCGT	7751	1.0241875276660126	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	6399	0.8455394129189543	No Hit
CTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTAGTATGCCGT	2151	0.2842249222048243	No Hit
TCTTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGCCG	1280	0.16913430981970018	No Hit
ATTATACACATCTCCGAGCCCACGAGACTTCGCGGCATCTCGTATGCCGT	1274	0.16834149274242036	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCGTTAA	20	7.925645E-5	70.00218	56
AGGGGGG	2595	0.0	57.458435	70
CGTTTGC	80	0.0	56.876774	41
GGTACGT	25	2.3878047E-4	56.01285	1
TGCCGTA	720	0.0	54.442543	45
GCCGTAA	455	0.0	53.844276	46
TATGCCG	2065	0.0	53.557453	43
GCCGTAT	360	0.0	53.470352	46
TCGTATG	1645	0.0	53.405922	40
TCTCGTA	2040	0.0	52.505104	38
CGCGTAA	40	7.475901E-7	52.505104	39
ATCTCGT	2160	0.0	52.339592	37
AAGCCGT	255	0.0	52.15849	44
CGTATGC	1665	0.0	52.133755	41
CTCGTAT	1820	0.0	52.120453	39
ATGCCGT	2160	0.0	51.36734	44
GCCGTCA	695	0.0	51.365112	46
CATCTCG	2530	0.0	51.32571	36
GTATGCC	2290	0.0	50.893417	42
CATCTAG	1190	0.0	48.825047	36