SRR1780765_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780765_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	271259
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	34565	12.742434352408583	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	9115	3.360257171190633	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCG	6921	2.551436081383475	No Hit
ATTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	6207	2.2882190084015646	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	1956	0.721082065479855	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	764	0.2816496411178984	No Hit
ATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTCTT	695	0.25621269709023475	No Hit
CTTATACACATCTCCGCGCCCACGAGACCCAAATAAATCTCGTATGCCGT	678	0.24994562392399883	No Hit
CTTATACACATCTCCGAGCCCACGAGACACAAATAAATCTCGTATGCCGT	658	0.24257259666960357	No Hit
CTTAAACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	446	0.16441850777301398	No Hit
CTAATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	414	0.1526216641659816	No Hit
ATCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	289	0.10654024382601131	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGTAT	35	3.6961865E-9	70.0083	46
CGTCTTA	75	0.0	65.32903	48
AGGGGGG	5170	0.0	65.133446	70
CATCTCG	65	0.0	64.62305	36
TGCCGTA	40	1.0621079E-8	61.25726	45
ATTATAC	1270	0.0	61.18836	1
GTATTCT	35	2.9687908E-7	59.99605	49
AACGTAT	30	8.357034E-6	58.34025	39
GCCGACT	105	0.0	56.673386	46
CATATGC	25	2.386371E-4	56.00664	51
AACTCGA	25	2.386371E-4	56.00664	37
TGACGAC	45	2.690831E-8	54.450897	45
ATCTCGT	7115	0.0	54.363434	37
CTTGAAA	7145	0.0	54.037193	57
TCTCGTA	7230	0.0	54.031303	38
CTCGTAT	7180	0.0	54.017544	39
AATCTCG	7110	0.0	54.00781	36
TCGTATG	7365	0.0	53.991463	40
CGTATGC	7235	0.0	53.897198	41
TATGCCG	7065	0.0	53.856346	43