SRR1780756_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780756_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	42169
Sequences flagged as poor quality	0
Sequence length	76
%GC	41

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	208	0.4932533377599658	No Hit
CTTATACACATCTCCGAGCCCACGAGACGGAGTAAGATCTCGTATGCCGT	78	0.1849700016599872	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATAGGAA	35	2.0531166E-5	50.0	3
AAGATCT	60	4.7475623E-9	46.666664	34
TCTTCTG	60	2.521174E-7	40.833332	50
GATCTCG	60	2.521174E-7	40.833332	36
CCGTCTT	70	1.8537321E-8	40.0	47
AGATCTC	55	6.5470467E-6	38.181816	35
CGTCTTC	65	4.7233152E-7	37.692307	48
GTATGCC	65	4.7233152E-7	37.692307	42
GTCTTCT	65	4.7233152E-7	37.692307	49
TCTCGTA	75	3.405694E-8	37.333336	38
GCCGTCT	75	3.405694E-8	37.333336	46
TGCCGTC	75	3.405694E-8	37.333336	45
CTGCTTG	60	1.1890306E-5	35.0	54
CGTATGC	80	6.0108505E-8	35.0	41
CTCGTAT	80	6.0108505E-8	35.0	39
TATGCCG	70	8.4386556E-7	35.0	43
ATGCCGT	80	6.0108505E-8	35.0	44
TCGTATG	85	1.0242002E-7	32.941177	40
ATCTCGT	75	1.4471971E-6	32.666668	37
CTTGAAA	75	1.4471971E-6	32.666668	57