SRR1780694_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780694_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	131241
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTACATG	20	0.006734379	52.897465	1
TAACGGT	20	0.006941376	52.494286	36
AAGCCAG	20	0.006941376	52.494286	12
GTTGTTC	20	0.006941376	52.494286	8
CCTGTAC	30	5.86342E-4	46.661587	40
TTAACGG	30	5.86342E-4	46.661587	35
TGGTACA	30	5.86342E-4	46.661587	46
CTGCTAC	40	4.5754172E-5	43.745235	67
GTTCTTA	35	0.0012061014	40.30283	1
GCCACTA	35	0.0012523785	39.995644	40
TATGTCA	35	0.0012523785	39.995644	52
GTCGCCC	40	0.0024129453	34.99619	37
AAGAGCG	40	0.0024129453	34.99619	27
CGGGGCG	40	0.0024129453	34.99619	51
CGCCATT	40	0.0024129453	34.99619	33
AGAAGTC	65	2.091491E-5	32.304173	5
GGAAGAG	55	2.981029E-4	31.814718	6
CGATGGT	55	2.981029E-4	31.814718	32
ATGTAGA	45	0.0042969864	31.107723	61
TAGCAAC	45	0.0042969864	31.107723	66