SRR1780559_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780559_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	40
Sequences flagged as poor quality	0
Sequence length	50
%GC	61

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
GCCCAGAACGGATGCCACGAACTCGGACTCCTCGGCCTGTCTCTTATACA	1	2.5	No Hit
GTACACGGGAGCGTCCGGCCCCCTGCGTCAGGCGATGCGCACCGGCATCA	1	2.5	No Hit
AGACAGCCCGAAGCGCCCGAGCTGAGGGAGTTGATCGTCATCTTCCTGTC	1	2.5	No Hit
GTCTAGTAAGGGCTTAGCTTAATTAAAGTGGCTGATTTGCGTTCAGTTGA	1	2.5	No Hit
ACTTCATGGTGGCCGTGCCGATCATGGCGGTCCCCGGCCTCCTCACGGCC	1	2.5	No Hit
CGCCAGGACCGCGTGATGACGCGCATGACCTGGGCGCTGTCTCTTATACA	1	2.5	No Hit
GCGCGGCTGGGTCATGGAGCGCGTGGAGGACGTCGCCGAGCCTGTCTCTT	1	2.5	No Hit
GCAGTAATGTTAGCGGTTAGGCGTACGGCCCGGGGTATTGGTTGGATGAG	1	2.5	No Hit
GCTCCGGGCCCATAACACTTGGGGGTAGCTAAAGTGAACCGTATCCGACA	1	2.5	No Hit
GCCCAGTCCGTGACCCAGGATCCGCGCCTGGCGGAATCGGTGGGCTCCGC	1	2.5	No Hit
GAAGGCTACAAAGTAAGCGCAAGTACCCACGTAAAGACGTTAGGTCAAGG	1	2.5	No Hit
CCCTTCCAGCAGCCCCCGGCGGCGCAGCATGCGCCGCTCGGCGGCTGTCT	1	2.5	No Hit
GGCCAACGCGCAGCAGCACCAGGACCGGGCGATGCTCGCCGAGGACGCGG	1	2.5	No Hit
ATCCTACACTCCAACTCATGAGACCCACAACAAATAGCCCTTCTAAACGC	1	2.5	No Hit
TCTCTTATACACATCTGACGCTGCCGACGATCCGTGCCCTGCCGCTTTCC	1	2.5	No Hit
GCGTGGTGATTGGTGCCGTGGTGGAGTGAACTGGGTATCGGTGGGGGGGT	1	2.5	No Hit
GGGGTTGGTGGGGCTGCGCGTAGCCGGTGCCTGCTTCGAAGCAGGGAGCC	1	2.5	No Hit
CGGTGCGCCTGCGCGGCCTGGAGGCGCACCAGGAGGTGCTGCTGGGCGGC	1	2.5	No Hit
AGCTTGGCGATGTCGGTGGTGAAGGCCTGCGCGGTGAGCTCTGTCTCTTA	1	2.5	No Hit
ATGATGGCCAGGCTGGTCTCGAACTCCTGGCCTCCCAAAGTGCTGGAATT	1	2.5	No Hit
CATAAATAGTATGGCTTTGAAGAAGGCGTGGGTACAGATGTGCAGGAATG	1	2.5	No Hit
CCGCGGCACCGGCTTCATCCGCGTGGTGTACCTCATGGTCTGTCTCTTAT	1	2.5	No Hit
ACATAACTGGAATACATACCAAAGAAGCATCTCTGCAAATATAAACATTT	1	2.5	No Hit
GAAATAGGGTCGACGCCGCACTCGTCCGGGGGGGATTTTATTCTGACACC	1	2.5	No Hit
GTGTTAGTCATGTTAGCTTGTTTCAGGTGCGAGATAGTAGTAGGGTCGTG	1	2.5	No Hit
GTGTGCGCCTCGACGGCGGCACCATCTACGCCGGTGCGGAGATCAGCCCC	1	2.5	No Hit
GGTTGTAATCCAGGGAGAATGCGTGCCCACCACGAGCACCGATACCGTGA	1	2.5	No Hit
CAGCCTGAGTCCACCGCCCACGCCCGCCACGGGGTCCCCGCCGGGGCGAC	1	2.5	No Hit
CTCTTACCGCGAGGATGAGCGGCTGCGTGAGGGAGGCAGGTGGCCCCACG	1	2.5	No Hit
GTGTAGGAAGAGGCAGATAAAGAATATTGAGGCGCCATTGGCGTGAAGGT	1	2.5	No Hit
GTTGGAGTGTAGGATAAATCATGCTAAGGCGAGGATGAAACCGATATCGC	1	2.5	No Hit
GCCATTCTCATCCAAACCCCCTGAAGCTTCACCGGCGCAGTCATTCTCAT	1	2.5	No Hit
ATCTTATCCACCTCTGACCCCGGCGACGCGGAGACGGTTATGGAGCTGGC	1	2.5	No Hit
GTTCGGCGCGCTGGACGTGGTGGACGAGCACGGCGCCCTGCGCCGCGCCC	1	2.5	No Hit
CAGCTCGAGTGCGCGGCCGGCGTCCACGTCCTCGCGCACGTCCGCGCCGA	1	2.5	No Hit
GTCCACCGCGAGCACGGGCGAGAAGAACACGACCCAGCCCAGGGCGGTCA	1	2.5	No Hit
NNTGAGAGGGCCCCTGTTAGGGGGCATGGGCTGGGGTTTATTATATGAGA	1	2.5	No Hit
ACCCGGTGCCGGGCGACCTCCACCGGCCCCTGCGCACCGGCGTCTGTCTC	1	2.5	No Hit
GCACGTGCACGTCCGCCGCACGCCAGGTGCGCTCCGGGACTGTCTCTTAT	1	2.5	No Hit
GCCCCACCCGCACTCTCGAACGTGATGTGGGGCCTATCTCTGTCTCTTAT	1	2.5	No Hit

Adapter Content

Adapter graph

Kmer Content

No overrepresented Kmers

Summary