SRR1780551_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780551_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	36
Sequences flagged as poor quality	0
Sequence length	50
%GC	62

Per base sequence quality

Per base quality graph

Per tile sequence quality

Per base quality graph

Per sequence quality scores

Per Sequence quality graph

Per base sequence content

Per sequence GC content

Per sequence GC content graph

Per base N content

N content graph

Sequence Length Distribution

Sequence length distribution

Sequence Duplication Levels

Duplication level graph

Overrepresented sequences

Sequence	Count	Percentage	Possible Source
CCCTACTTCTAACCTCCCTGTTCTTATGAATTCGAACAGCATACCCCCGA	1	2.7777777777777777	No Hit
CGCTCGAGCCGGTCGCCCATCAGGGCGATGTCCGCGGCTGTCTCTTATAC	1	2.7777777777777777	No Hit
ATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTCTT	1	2.7777777777777777	No Hit
GAGTTGGAGGCCTCGATCACCCGGTAGATGTCGATGCCGTTCGCGCCGGC	1	2.7777777777777777	No Hit
CTCTACGTCCGCGTCAAGCTCGAGGAGACCCCGGTCTCTGTCTCTTATAC	1	2.7777777777777777	No Hit
GTTGCCTTCCAAGGCCATTCATCCTGTTCTCTTTTTGGGCTCCTGTAGCA	1	2.7777777777777777	No Hit
TTCCAAGGCCGTAGGATTGCACCTCCAGGCCCAGTGGAGCCTGGCAGCTG	1	2.7777777777777777	No Hit
CATCTACGCTGCTGTCTCTTATACACATCTCCGAGCCCACGAGACCCAAA	1	2.7777777777777777	No Hit
GGAGGAGGCCGCCACCGCCGAGGACGTGCTGCTGTCTCTTATACACATCT	1	2.7777777777777777	No Hit
CTCCTATGATGGCAAATACAGCTCCTATTGATAGGACATAGTGGAAGTGA	1	2.7777777777777777	No Hit
GTGCGGGCGGGCAGGTCGCGGACCGCCAGCTCGGAGACGACGCCGGCCAC	1	2.7777777777777777	No Hit
ACCATGCAGACCGAGACCGGGGTGCCGGTCGACATCGTCCTCGTGGTGCT	1	2.7777777777777777	No Hit
GTGTTGACCGCTCCGGTCAGGAGGAGGGCCCCGCGCGGTGTCAGCGCTGT	1	2.7777777777777777	No Hit
GCCGACGGCGATCTGCATGCCCGGGTGCGCGTCCTTCACCTGTCTCTTAT	1	2.7777777777777777	No Hit
AAGGTGCAGTCGCCCCGGGAGACCAGGGCGACGCTGCCGGTCAGGTCCGC	1	2.7777777777777777	No Hit
GAGACCTGTGGGAAGCGAAAACTGTCTCTTATACACATCTCCGAGCCCAC	1	2.7777777777777777	No Hit
CCCCGAGACCGGCGCGGAGCCCACCGCGCCCGTGGCGGAGATCTCCCCCT	1	2.7777777777777777	No Hit
GTCTCTTATACACATCTCCGAGCCCACCCAACACGATCTCGTATGCCGTC	1	2.7777777777777777	Illumina PCR Primer Index 1 (95% over 22bp)
AGGTTCCACTGGCCGCCCCAGTCGTCCTGGCGCTCGAACGCCTGTCTCTT	1	2.7777777777777777	No Hit
GAGCTACCTTAGACCATTGCCAAGGCCAAATTGCGGCAGCTTTCACCCAG	1	2.7777777777777777	No Hit
GGGTGATCTCGATCGACTGCCCGAAGCCGGCCAGAGCCTCGTCCACCGAG	1	2.7777777777777777	No Hit
CACCAGGGCGATGAACAGCGCGGGCACCCCCCACCGCCACGCGGTGAGCG	1	2.7777777777777777	No Hit
TCTTATACAGATCTCCGAGCCACGAGACGGCGTCGAATCTCGTATGCCGT	1	2.7777777777777777	No Hit
GTATCTAGCTGCTCTGGTGGGGCCTTGGAGAACCTGTGTGTCAAAACTCT	1	2.7777777777777777	No Hit
CAAGACGTCTTGCACTCATGAGCTGTCCCCACATTAGGCTTAAAAACAGA	1	2.7777777777777777	No Hit
CTACAAGGCCACCTCAAGTGCGATGCAGGTGGCACCGGATCAGCACAGCG	1	2.7777777777777777	No Hit
CCAGAACACTACGAGCCCACGAGACGATCCAAAATCTCGTATGCCGTCTT	1	2.7777777777777777	Illumina PCR Primer Index 6 (95% over 22bp)
ATCCTCGCCGGCGCGGCATGGCCGGGAGCGCGCCGGCGAGGATGCACCAT	1	2.7777777777777777	No Hit
GTCGAGGAGCGTGCGCGTGGCGGCCCGCCCCGAGGCGCTCGTGGCGCCCG	1	2.7777777777777777	No Hit
GGGCCGCCGTGGGCGCGGATCGCGGCGCGGACCCTGTCTCTTATACACAT	1	2.7777777777777777	No Hit
GCGAGCGCCCGGGCGGCCTCGGGGTCGAGCCGACCGGGGCGGCGGACGAG	1	2.7777777777777777	No Hit
CTTCCGGCTCTTCGACAACCACCGGTACGCGCACATCCTGTCTCTTATAC	1	2.7777777777777777	No Hit
GCCCTCGCCGCGGTGCTCGCCCTCGACGCGGCCGGTGGTCCCCCGCTGGG	1	2.7777777777777777	No Hit
GAGGTGGTGCTGCGGGTGTCCTCGTGCCAGTGGCGGGGGTCCTCCCTCCT	1	2.7777777777777777	No Hit
CCGCCAGGTCCTTTGAGTTTTAAGCCTGTCTCTTATACACATCTCCGAGC	1	2.7777777777777777	No Hit
AGCCTATGAAGGCTGTTGCTATAGTTGCAAGCAGGAGGATAATGCCGATG	1	2.7777777777777777	No Hit

Adapter Content

Adapter graph

Kmer Content

No overrepresented Kmers

Summary