SRR1780527_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780527_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	503718
Sequences flagged as poor quality	0
Sequence length	50
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGTCGTT	25	0.0023441506	35.22244	38
ACCTGGT	30	0.005707332	29.36956	15
TCGCTAC	40	6.955602E-4	27.547668	20
AACGTTA	40	7.077953E-4	27.465624	8
TATCGTC	45	0.0013886786	24.469763	13
GACTATC	45	0.0013919022	24.460028	38
AGATATC	45	0.0013927091	24.457594	40
CGTTATC	45	0.001395132	24.4503	10
ACGTTAT	45	0.0014072991	24.41389	9
CCCGGTC	45	0.0014072991	24.41389	8
CCCGTGG	50	0.002552559	22.038136	20
GCGCTAT	60	2.8380376E-4	22.03594	19
GTAGAGC	50	0.002568839	22.014025	38
ACATGTT	70	3.2268188E-5	21.985596	29
TCTCGGG	115	8.867573E-9	21.017176	43
TCAATCC	130	1.5825208E-9	20.342896	21
GCGACAA	65	4.8858166E-4	20.332773	16
GGCAATG	65	4.8858166E-4	20.332773	16
TCGTCAC	65	4.8858166E-4	20.332773	15
CCGTTTA	130	1.5970727E-9	20.328726	13