SRR1780420_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780420_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	99205
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCCGTGG	15	0.0022195973	69.99445	11
CCAGATG	20	0.0069355927	52.495842	45
TGATTCG	20	0.0069355927	52.495842	59
AAACATG	20	0.0069355927	52.495842	23
GCCAGAT	20	0.0069355927	52.495842	44
GATTCGG	20	0.0069355927	52.495842	60
TCACGTC	20	0.0069355927	52.495842	45
GCACCAA	45	0.0042913565	31.108646	50
TTGGCTC	50	0.0071819266	27.997782	56
GGTCAAT	50	0.0071819266	27.997782	32
TTCCACG	50	0.0071819266	27.997782	34
TACTGCT	50	0.0071819266	27.997782	51
CTCGCCA	50	0.0071819266	27.997782	46
CAGTACA	50	0.0071819266	27.997782	9
TAGGAAG	50	0.0071819266	27.997782	20
GGATAAA	65	7.6584105E-4	27.071037	1
ATTTATG	65	7.911565E-4	26.920944	34
TCTCGGT	65	7.911565E-4	26.920944	43
ACTTTCC	65	7.911565E-4	26.920944	64
ATCATCA	70	0.0012192323	24.99802	69