SRR1780418_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780418_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	95492
Sequences flagged as poor quality	0
Sequence length	76
%GC	46

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAACAC	15	0.0022194325	69.99371	64
TTAAGTC	15	0.0022194325	69.99371	40
GCGTGTA	15	0.0022194325	69.99371	34
TGGTCGC	15	0.0022194325	69.99371	49
TAGAGAG	20	0.0069350842	52.495285	5
CGGTGGT	20	0.0069350842	52.495285	46
AAGGGAA	20	0.0069350842	52.495285	15
AACTAGC	20	0.0069350842	52.495285	36
TCGGTGG	20	0.0069350842	52.495285	45
GTAGTTC	20	0.0069350842	52.495285	47
TCGCCGT	30	5.8547914E-4	46.662476	52
GTCGCCG	35	0.0012505455	39.99641	51
TGTTAAC	35	0.0012505455	39.99641	18
ATCTCGG	40	0.0024094353	34.996857	42
GGTGGTC	40	0.0024094353	34.996857	47
AAGTCCC	40	0.0024094353	34.996857	42
TCTCGGT	55	2.9746475E-4	31.815323	43
CGGATGA	45	0.0042907726	31.108315	33
CTTTAAC	45	0.0042907726	31.108315	42
ATTGAAC	45	0.0042907726	31.108315	27