SRR1780374_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780374_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	59466
Sequences flagged as poor quality	0
Sequence length	76
%GC	45

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTATG	15	0.002216096	69.98739	50
GAGCCGA	15	0.002216096	69.98739	11
ATATAGG	20	0.006585232	53.161198	1
TGAGCCG	20	0.0069247503	52.49054	10
AGTGTAA	20	0.0069247503	52.49054	35
TCGGTGG	30	5.8394676E-4	46.658257	45
TCTCGGT	35	0.0012472945	39.99279	43
CGGTGGT	40	0.002403213	34.99369	46
ATCTCGG	50	0.0071626594	27.994955	42
AATGGCT	50	0.0071626594	27.994955	22
AAGTGTA	65	7.878717E-4	26.918222	34
ATGTTGT	80	0.0026405612	21.871058	6
ATGCACG	95	0.0071398807	18.417734	70
GCCTGTC	125	0.0017383024	16.796972	59
CGACGAT	295	4.0563464E-10	16.607176	70
ACGATGC	205	2.1119107E-4	13.6560755	70
CCGACGA	400	2.9629518E-8	12.247793	69
GACGATG	245	9.4905775E-4	11.426512	69
TGCCGAC	480	3.1164745E-8	10.935529	70
GCCGACG	420	7.4220407E-7	10.831381	68