SRR1780352_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780352_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	152805
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGATTA	30	8.345514E-6	58.333332	37
GATCGAA	20	0.006940563	52.500004	30
CTAAGGG	20	0.006940563	52.500004	36
CTTATTG	20	0.006940563	52.500004	40
CTTATAA	20	0.006940563	52.500004	1
AGCTAGA	20	0.006940563	52.500004	1
AGGACCG	30	5.863326E-4	46.666664	5
GTAGGTA	30	5.863326E-4	46.666664	47
GTAGATT	40	4.5760342E-5	43.750004	36
GGTGCTA	45	9.1644935E-5	38.88889	58
AGCCCGG	40	0.002412896	35.000004	30
AAAGGAG	40	0.002412896	35.000004	5
GTGCTAA	50	1.7035654E-4	35.0	59
AGTGTGA	55	2.9814086E-4	31.81818	19
GAGGACC	45	0.0042968923	31.111113	4
CGGGCTA	45	0.0042968923	31.111113	41
GTTAGAT	60	4.964334E-4	29.166666	3
TAACCGT	50	0.0071911262	27.999998	4
CATAGAC	50	0.0071911262	27.999998	2
TCTCGTT	50	0.0071911262	27.999998	43