SRR1780332_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780332_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	215999
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GCAACCG	20	0.0069444324	52.5	39
GAGAACA	20	0.0069444324	52.5	45
GAATTGA	20	0.0069444324	52.5	27
AGAGATC	20	0.0069444324	52.5	7
GACAAAT	30	5.8687443E-4	46.666664	47
AGTCTTG	30	5.8687443E-4	46.666664	11
GGACAAA	30	5.8687443E-4	46.666664	46
TGTAAAC	30	5.8687443E-4	46.666664	16
TAAACCG	35	0.001253506	40.0	18
CGAATAT	35	0.001253506	40.0	69
CCCATAG	45	9.1770984E-5	38.888885	1
TTAATAC	40	0.0024150996	35.0	3
AAAAGCA	40	0.0024150996	35.0	15
AAAGTTG	40	0.0024150996	35.0	15
TAGGGAT	40	0.0024150996	35.0	69
GAGATCA	40	0.0024150996	35.0	8
GTAAACC	55	2.9854683E-4	31.81818	17
TCATTAG	45	0.0043007927	31.111109	35
ATTGTTA	45	0.0043007927	31.111109	39
GTATAAA	60	4.971058E-4	29.166666	1