SRR1780326_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780326_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	131361
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGAATCA	20	7.902541E-5	70.00001	35
CCCATTG	15	0.002220508	70.0	24
GAGTTAG	20	0.006938404	52.500004	1
GAACCGT	20	0.006938404	52.500004	32
TAGGATC	35	0.001251713	40.0	24
TCCCGAA	40	0.0024116663	35.000004	32
CCGAATC	40	0.0024116663	35.000004	34
GGACAGC	40	0.0024116663	35.000004	6
CCCGAAT	40	0.0024116663	35.000004	33
TCATAAA	45	0.0042947163	31.111109	59
GGATCCT	60	4.9605814E-4	29.166666	26
CGTATCA	50	0.007187505	27.999998	57
CTCCCGA	50	0.007187505	27.999998	31
GAATCAA	50	0.007187505	27.999998	36
TTCATAA	65	7.921658E-4	26.923079	58
ATATCTC	75	0.0018244415	23.333334	40
GGATTAG	75	0.0018244415	23.333334	1
ACGACGG	90	1.9162487E-4	23.333332	5
TATATCT	115	4.0839066E-5	21.304348	39
ATGATAT	90	0.005252512	19.444443	18