SRR1780325_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780325_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	504718
Sequences flagged as poor quality	0
Sequence length	50
%GC	58

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGCGAT	35	3.1785652E-4	31.490067	16
TTGACAC	30	0.0056845136	29.39365	18
AGGTAAC	30	0.0057066483	29.370289	40
GTTTACA	30	0.0057846555	29.28882	1
CTTATAA	30	0.0057846555	29.28882	1
ATTGCGA	40	6.946563E-4	27.553808	15
GATTTCG	40	7.0726575E-4	27.469154	41
CGATTAG	45	0.001380461	24.494709	19
CATTGCG	45	0.0013860689	24.477673	14
CCAGTTG	45	0.0013860689	24.477673	14
GGTACAA	45	0.0014038156	24.424286	30
TTCTAAG	45	0.0014095014	24.407349	2
ATTAGAG	45	0.0014095014	24.407349	3
CCATATT	45	0.0014095014	24.407349	2
GTTGTAA	55	1.6083058E-4	23.963581	1
AACATTG	65	1.8264702E-5	23.66573	42
ACATTGT	65	1.8292745E-5	23.661041	43
CCATTGC	50	0.0025625397	22.02334	13
ATGCCAT	50	0.0025788422	21.999306	10
GTTACTG	70	3.238499E-5	21.975323	31