SRR1780324_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780324_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	156827
Sequences flagged as poor quality	0
Sequence length	76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AAGAATC	20	0.006940901	52.500004	7
TCGATTC	20	0.006940901	52.500004	4
CCGAAAT	20	0.006940901	52.500004	47
GCATGTA	20	0.006940901	52.500004	2
GACGAAT	40	4.5765857E-5	43.750004	23
ACGAATT	40	4.5765857E-5	43.750004	24
CTATCGG	35	0.0012524554	40.000004	42
ATAAGAG	45	9.16559E-5	38.88889	3
GAGTGAC	40	0.0024130882	35.000004	25
AGGAGTG	40	0.0024130882	35.000004	5
AAGAGCA	40	0.0024130882	35.000004	16
TTCCCAG	40	0.0024130882	35.000004	38
AGTGACT	40	0.0024130882	35.000004	26
TACAGTA	45	0.0042972313	31.111113	54
TAGATCT	80	2.4507062E-6	30.625002	39
GTAGATC	70	3.4718512E-5	30.000002	38
ACAGTAG	50	0.007191692	27.999998	55
TTGTCTG	50	0.007191692	27.999998	9
CGGTGTA	50	0.007191692	27.999998	34
GGAGTGA	50	0.007191692	27.999998	6