SRR1780318_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780318_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	102572
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATCGGTG	15	0.0022191147	70.00001	59
TGTACTA	15	0.0022191147	70.00001	37
AATCGGT	15	0.0022191147	70.00001	58
ACGTATC	20	0.0069340854	52.5	57
TCTGGAG	20	0.0069340854	52.5	3
TGCGTTC	20	0.0069340854	52.5	34
GATCTCT	30	5.854251E-4	46.666668	41
TGGACAA	40	4.5654517E-5	43.75	51
CTGGAGG	40	4.5654517E-5	43.75	4
TTGGACA	35	0.0012504292	40.0	50
CGAATGT	35	0.0012504292	40.0	29
TTATCCA	45	9.143404E-5	38.888885	2
GAATGTG	40	0.0024092074	35.0	30
CTTCCGA	40	0.0024092074	35.0	18
TTCCGAC	40	0.0024092074	35.0	19
GTATCAT	40	0.0024092074	35.0	59
ATGTGTG	45	0.0042903633	31.111109	32
GCTTCCG	45	0.0042903633	31.111109	17
AAGGAGT	45	0.0042903633	31.111109	4
AATGTGT	45	0.0042903633	31.111109	31