SRR1780314_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780314_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	147003
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCCCTA	20	0.006940042	52.5	12
AGTTAAT	20	0.006940042	52.5	65
GATGGAC	50	1.7032506E-4	35.000004	30
TTCGGCG	60	1.2093569E-5	35.000004	13
GTTAATA	40	0.002412599	35.0	2
GAACGAA	40	0.002412599	35.0	26
CGACGAA	90	4.452886E-9	34.999996	22
TAGATCT	85	1.05428626E-7	32.941177	39
ATGGACC	45	0.0042963666	31.111109	31
AAACGAA	45	0.0042963666	31.111109	18
AACGAAT	45	0.0042963666	31.111109	27
CGACTCA	45	0.0042963666	31.111109	31
ACATAAG	45	0.0042963666	31.111109	28
ACGAATG	70	3.4703902E-5	30.0	28
TGGAGTC	50	0.00719025	28.000002	27
CGACGCA	50	0.00719025	28.000002	22
ATTCGGC	50	0.00719025	28.000002	12
CGGTGGT	65	7.9261826E-4	26.923077	46
ACGAACG	65	7.9261826E-4	26.923077	24
TCTCGGT	95	9.325282E-6	25.789474	43