SRR1780308_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780308_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	147216
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTGCAAT	15	0.0022210418	70.00001	16
GATGTAT	20	0.0069400608	52.5	24
ACCCTTG	20	0.0069400608	52.5	62
CTTTCGC	20	0.0069400608	52.5	42
TTGCATG	20	0.0069400608	52.5	14
TTGCAAC	20	0.0069400608	52.5	30
CTGATTA	20	0.0069400608	52.5	41
GGATTGC	35	2.078531E-5	50.000004	6
GATTACT	30	5.86262E-4	46.666668	43
TGATTAC	35	0.0012522053	40.000004	42
TAGATCT	75	3.506466E-8	37.333332	39
GTTTAAC	50	1.7032622E-4	35.0	33
TAGCCCG	40	0.0024126098	35.0	5
GCCGTAT	40	0.0024126098	35.0	54
AGATCTC	90	4.452886E-9	34.999996	40
TATAGAG	45	0.004296385	31.111109	7
GATTCTA	45	0.004296385	31.111109	33
CACCCGT	60	4.9634586E-4	29.166668	6
TGCCATC	50	0.0071902825	27.999998	52
CGCCTCA	50	0.0071902825	27.999998	64