SRR1780302_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780302_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	145822
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGTTGTG	15	0.0022209994	70.0	67
CTCTGAA	15	0.0022209994	70.0	21
GTCTGCA	20	0.006939931	52.5	57
TATGGAC	20	0.006939931	52.5	67
CCGAGTT	20	0.006939931	52.5	60
CCAGTAT	20	0.006939931	52.5	31
CGAAGAC	20	0.006939931	52.5	21
AGACGTA	35	0.0012521665	40.0	5
GCCTAAA	35	0.0012521665	40.0	1
TCGCATA	40	0.0024125353	35.0	40
AGAAATC	50	1.7031828E-4	35.0	47
GAAATCG	55	2.9807424E-4	31.818184	48
GCCTTAA	45	0.004296252	31.111113	60
CGACGAT	45	0.004296252	31.111113	19
ATAGACG	45	0.004296252	31.111113	3
TTATCAA	45	0.004296252	31.111113	32
CATCAAT	45	0.004296252	31.111113	12
CTACTGA	60	4.96323E-4	29.166666	33
TCACATC	50	0.0071900613	27.999998	44
CTTCAGC	50	0.0071900613	27.999998	17