SRR1780282_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780282_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	121188
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TAGATCT	70	3.783498E-10	45.0	39
GATCTCT	35	0.0012513282	40.0	41
GAATGTG	40	0.0024109297	35.0	32
CATAGGC	40	0.0024109297	35.0	51
TTAACAG	40	0.0024109297	35.0	39
CGACGAT	55	2.9777866E-4	31.81818	22
TCGGTGG	55	2.9777866E-4	31.81818	45
GTAGATC	90	1.7367893E-7	31.111113	38
GCCCAAT	50	0.007185333	28.000002	45
CTGCATG	50	0.007185333	28.000002	40
GTATCAT	65	7.918084E-4	26.923079	57
AGATCTC	95	9.307598E-6	25.789473	40
TGTAGAT	125	1.0833355E-7	25.199999	37
GTGTAGA	120	2.1424185E-6	23.333332	36
ATGCCGA	80	0.0026535324	21.875	18
GGTGTAG	100	3.9056863E-4	21.000002	35
GACGAAC	100	3.9056863E-4	21.000002	23
ACCAGAC	85	0.003771512	20.588236	33
GATGCCG	85	0.003771512	20.588236	17
ATTGAAC	390	0.0	18.846153	70