SRR1780268_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780268_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	124072
Sequences flagged as poor quality	0
Sequence length	76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CCAGCAA	20	0.0069375	52.5	1
CGGTATG	30	5.859032E-4	46.666668	43
CCCGCAA	30	5.859032E-4	46.666668	1
CACTAAG	40	4.5710272E-5	43.75	36
GTCGTAA	35	0.0012514439	40.0	21
GGCGGTA	35	0.0012514439	40.0	41
GCGGTAT	40	0.0024111513	35.0	42
TAAACAG	40	0.0024111513	35.0	37
CCAGATT	40	0.0024111513	35.0	18
ATGCACT	40	0.0024111513	35.0	47
ATAAGAG	65	2.08902E-5	32.307693	3
CATCTTA	55	2.9781938E-4	31.818184	10
GAGTGTG	45	0.0042938036	31.111109	7
CTATGAA	45	0.0042938036	31.111109	2
CTTTTGG	45	0.0042938036	31.111109	36
ACAATCC	45	0.0042938036	31.111109	16
ACGCTTC	45	0.0042938036	31.111109	15
GGTCTAG	45	0.0042938036	31.111109	1
AACAGTC	45	0.0042938036	31.111109	57
CTTGTTC	50	0.0071859877	27.999998	3