SRR1780260_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780260_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	204133
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTCGTGT	40	4.581472E-5	43.75	12
ACGATGT	45	9.175326E-5	38.888885	22
TAGATCT	100	7.2759576E-12	38.5	39
TCGTTGT	65	4.843969E-7	37.692307	34
TCGTGTA	50	1.7055686E-4	35.0	13
ATCGGTT	40	0.0024147904	35.0	25
CGTCAGA	40	0.0024147904	35.0	2
GGGTCCG	45	0.004300244	31.111109	22
TTTGTAA	45	0.004300244	31.111109	31
TGAGCGG	45	0.004300244	31.111109	8
CAATACG	45	0.004300244	31.111109	69
AGTGTGT	45	0.004300244	31.111109	12
CATCGTT	70	3.4769408E-5	30.000002	32
ACCCGTA	60	4.970113E-4	29.166666	2
TGATATG	75	5.565908E-5	28.000002	19
CGACCAA	75	5.565908E-5	28.000002	12
GCCTTAC	50	0.0071967007	27.999998	7
TGCATAA	50	0.0071967007	27.999998	14
TCAGATG	50	0.0071967007	27.999998	4
AGACAAT	50	0.0071967007	27.999998	16