SRR1780256_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780256_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	171054
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGAATGA	25	2.3852682E-4	55.999996	40
GGAGCGA	20	0.0069419765	52.5	7
GTACACT	35	0.0012527752	40.0	36
ATGGTTG	35	0.0012527752	40.0	46
TTGCATT	35	0.0012527752	40.0	13
CGTCCAA	35	0.0012527752	40.0	17
TCCAGTA	40	0.0024137006	35.0	32
TGTTACG	40	0.0024137006	35.0	48
ACATGAG	40	0.0024137006	35.0	27
CGGTCAG	40	0.0024137006	35.0	27
CGACTTG	40	0.0024137006	35.0	53
GCCGTAT	50	1.7044156E-4	35.0	54
CGCCGTA	55	2.982889E-4	31.818184	53
CAAGTGC	45	0.0042983145	31.111113	21
ACTTACC	45	0.0042983145	31.111113	40
GTTACGA	45	0.0042983145	31.111113	49
TGACAGC	45	0.0042983145	31.111113	20
TAATACA	80	2.4524306E-6	30.625	4
CTTGTCT	60	4.966787E-4	29.166666	56
TTGTCTC	60	4.966787E-4	29.166666	57