SRR1780250_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780250_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	75241
Sequences flagged as poor quality	0
Sequence length	76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GTTATGA	15	0.0022168055	70.0	19
AACCGTG	20	0.006926924	52.500004	32
CAGAACT	20	0.006926924	52.500004	4
GAACTAA	20	0.006926924	52.500004	6
CGTCTTA	20	0.006926924	52.500004	6
AGTTATG	20	0.006926924	52.500004	18
GGGTTAG	20	0.006926924	52.500004	1
ACCGTGT	20	0.006926924	52.500004	33
GAACCGT	20	0.006926924	52.500004	31
TTCGAAA	20	0.006926924	52.500004	30
AATGAGC	30	5.8442284E-4	46.666664	32
CGGTGTA	35	0.0012483009	40.000004	34
CACAGAA	35	0.0012483009	40.000004	2
TGCTCTC	40	0.002405132	35.000004	40
ACAGAAC	40	0.002405132	35.000004	3
TCGGTGG	65	2.0781494E-5	32.307693	45
CTTAATA	55	2.9671166E-4	31.81818	2
ATCTCGG	45	0.0042831507	31.111109	42
CAGGAAT	45	0.0042831507	31.111109	13
AGATCTC	70	3.4481007E-5	30.000002	40