SRR1780248_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780248_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	120276
Sequences flagged as poor quality	0
Sequence length	76
%GC	50

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCACAA	15	0.0022200495	70.00001	33
TGTGTCC	15	0.0022200495	70.00001	7
TAGCTAC	25	2.3824078E-4	55.999996	54
GATACAG	20	0.0069369846	52.5	40
CGTGAAA	20	0.0069369846	52.5	17
AGGAACC	20	0.0069369846	52.5	25
GCACAAG	20	0.0069369846	52.5	34
GGAACCA	20	0.0069369846	52.5	26
CAAGAGT	20	0.0069369846	52.5	37
GCTACAG	20	0.0069369846	52.5	3
TACAGTT	20	0.0069369846	52.5	42
AACATGG	45	0.0042932853	31.111109	21
TAACAGA	45	0.0042932853	31.111109	6
AGTTCAC	45	0.0042932853	31.111109	45
AGCAGTC	45	0.0042932853	31.111109	27
TCTTACG	70	3.4651872E-5	30.0	8
CAGTTCA	50	0.0071851243	27.999998	44
TCTCGTT	50	0.0071851243	27.999998	43
TAGATCT	100	4.369358E-7	27.999998	39
CTGGGTT	50	0.0071851243	27.999998	56