SRR1780220_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780220_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	145658
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TCTTACG	15	0.0022209948	70.00001	11
TTTAACG	20	0.0069399164	52.499996	34
TAACGGC	20	0.0069399164	52.499996	36
TACTGTG	20	0.0069399164	52.499996	31
TGACAGG	20	0.0069399164	52.499996	4
ATTTCGC	20	0.0069399164	52.499996	57
ATTAGAG	30	5.8624154E-4	46.666668	3
GACACAT	35	0.0012521622	40.0	26
CACTAAG	35	0.0012521622	40.0	65
GCCCTAA	35	0.0012521622	40.0	1
GTGACAC	35	0.0012521622	40.0	24
GAGGCAC	35	0.0012521622	40.0	7
ACATGTT	45	9.162379E-5	38.888885	29
AGGCACC	50	1.7031736E-4	35.000004	8
TTTGCAC	50	1.7031736E-4	35.000004	45
GACTACT	40	0.0024125273	34.999996	37
CACGACG	55	2.980728E-4	31.81818	4
ATCTCGG	45	0.004296238	31.111109	42
ACCTTTG	45	0.004296238	31.111109	42
ACCTTAA	45	0.004296238	31.111109	1