SRR1780198_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780198_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	70373
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTAGAA	15	0.0022162087	70.0	2
GAAGCGG	15	0.0022162087	70.0	11
AATTTCC	20	0.006925075	52.5	16
AGGGTAA	20	0.006925075	52.5	12
CCTCGAT	20	0.006925075	52.5	36
CGGATGC	20	0.006925075	52.5	34
GGACCAC	20	0.006925075	52.5	16
GACTACA	20	0.006925075	52.5	40
TCTTACG	35	0.0012477514	40.0	11
TTACGCT	35	0.0012477514	40.0	13
CTTACGC	35	0.0012477514	40.0	12
AACAAGC	40	0.0024040798	35.0	32
CGTATCA	50	1.6942459E-4	35.0	53
TATACCC	50	1.6942459E-4	35.0	3
GCCGTAT	40	0.0024040798	35.0	51
ATCTTAC	65	2.0762494E-5	32.307693	10
ACATCTT	65	2.0762494E-5	32.307693	8
CGACGAA	45	0.0042812866	31.111109	19
GTATCAT	60	4.937447E-4	29.166666	54
TTCTACA	50	0.007165167	27.999998	2