SRR1780190_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780190_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	87270
Sequences flagged as poor quality	0
Sequence length	76
%GC	51

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ATACGGG	15	0.0022180013	70.0	63
ATCCTTC	20	0.006930632	52.5	59
AAGTAAT	20	0.006930632	52.5	57
GAAGCGA	20	0.006930632	52.5	42
TTATGCC	20	0.006930632	52.5	46
ACTTCGC	20	0.006930632	52.5	65
GCTCTAC	20	0.006930632	52.5	1
TGGTCTA	20	0.006930632	52.5	43
ATCTCAT	30	5.849418E-4	46.666664	23
CGACGAA	35	0.0012494029	40.0	22
CTTTGAG	35	0.0012494029	40.0	32
CTGCAGC	55	6.6283537E-6	38.18182	1
CATTAAG	40	0.0024072418	35.0	53
CCTTTGA	40	0.0024072418	35.0	31
AAAAAGA	45	0.004286885	31.111109	51
CGCCAAC	45	0.004286885	31.111109	21
TAGATCT	70	3.4543933E-5	30.0	39
TTGGCTT	50	0.007174478	27.999998	4
GACAACA	50	0.007174478	27.999998	40
GTTAGGA	50	0.007174478	27.999998	3