SRR1780188_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780188_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	98669
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGCTAAA	15	0.0022188642	70.0	1
CGTGATA	20	0.0069333063	52.500004	25
ACCTTAG	20	0.0069333063	52.500004	1
TATGACG	30	5.853163E-4	46.666664	11
CATGGTT	35	0.0012501976	40.0	14
GAGTAAT	35	0.0012501976	40.0	1
GAGACAG	35	0.0012501976	40.0	7
GTCCCGG	35	0.0012501976	40.0	1
AGGCTGG	45	9.140871E-5	38.888885	5
GCATGGT	40	0.002408764	35.000004	13
AGTGTGC	50	1.6991956E-4	35.000004	8
GTTGCAC	40	0.002408764	35.000004	37
AGATCTC	55	2.9737994E-4	31.818184	40
GTAGATC	55	2.9737994E-4	31.818184	38
CTTCCGA	45	0.0042895786	31.111109	18
AAGAGAC	45	0.0042895786	31.111109	5
CGACGAT	45	0.0042895786	31.111109	22
TTCCGAC	45	0.0042895786	31.111109	19
TGCATGG	45	0.0042895786	31.111109	12
TAAGACC	45	0.0042895786	31.111109	60