SRR1780168_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780168_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	268373
Sequences flagged as poor quality	0
Sequence length	76
%GC	52

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

No overrepresented sequences

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTTAACG	30	8.362673E-6	58.333332	34
TTAGACC	20	0.0069462606	52.5	62
CTGTGTA	20	0.0069462606	52.5	31
GGTACCC	35	2.0831601E-5	50.0	46
TAACGGC	35	2.0831601E-5	50.0	36
TAACCGT	35	2.0831601E-5	50.0	53
TTAACGG	35	2.0831601E-5	50.0	35
ATTAGAG	45	9.183056E-5	38.888885	3
GAACCTC	45	9.183056E-5	38.888885	17
GTGCAAA	50	1.7069984E-4	35.0	58
GACACAT	40	0.0024161413	35.0	26
CGCAATA	50	1.7069984E-4	35.0	57
CAAAGGT	50	1.7069984E-4	35.0	61
CAGTGAC	65	2.0980518E-5	32.307693	22
CGCGGTA	55	2.9873874E-4	31.81818	43
CGGTACC	55	2.9873874E-4	31.81818	45
CGATAGA	55	2.9873874E-4	31.81818	37
GATACTA	45	0.0043026353	31.111109	1
TGAGACC	45	0.0043026353	31.111109	19
CTCCGGT	60	4.974238E-4	29.166666	7