SRR1780157_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780157_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	328243
Sequences flagged as poor quality	0
Sequence length	76
%GC	57

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	50751	15.461411210597026	No Hit
CTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGGTG	8441	2.5715704523782685	No Hit
TCTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGGT	820	0.24981492369981995	No Hit
CTCTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGG	615	0.18736119277486496	No Hit
ATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGGTGGTC	415	0.1264307235797869	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGGTCGA	15	0.0022236186	69.99893	49
TGGTCGC	1170	0.0	54.44362	49
GCCGTAT	1155	0.0	53.938572	54
TCGGTGG	1185	0.0	53.4591	45
CGGTGGT	1200	0.0	53.374187	46
CGTATCA	1175	0.0	53.318336	56
TCGCCGT	1170	0.0	53.247055	52
CTCGGTG	1195	0.0	53.011745	44
TCTCGGT	1190	0.0	52.94037	43
GTGGTCG	1230	0.0	52.926025	48
CGCCGTA	1200	0.0	52.790863	53
AATCCGC	20	0.006948054	52.4992	62
ACGTATC	20	0.006948054	52.4992	55
GATCTTA	20	0.006948054	52.4992	1
GTCGCCG	1215	0.0	52.427185	51
CCGTATC	1190	0.0	52.352142	55
GGTGGTC	1240	0.0	52.216946	47
GTAGATC	1220	0.0	52.21232	38
ATCTCGG	1200	0.0	52.20754	42
TAGATCT	1235	0.0	51.01137	39