SRR1780155_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780155_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	123386
Sequences flagged as poor quality	0
Sequence length	76
%GC	74

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	57058	46.243496020618224	No Hit
CTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGGTG	9415	7.630525343231809	No Hit
TCTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGGT	893	0.7237449953803511	No Hit
CTCTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGG	522	0.4230625840857148	No Hit
ATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGGTGGTC	399	0.32337542346781645	No Hit
TCTTTATACACATCTGACGCTGCCGACGACGTTGCTGGTGTAGATCTCGG	301	0.2439498808616861	No Hit
CTTATACACATCTGACGCTGCCGACGACGATGCTGGTGTAGATCTCGGTG	124	0.10049762533836902	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TTGTGCG	15	0.0022187051	70.011765	2
TCTCGGA	15	0.0022187051	70.011765	43
ACAATGG	15	0.0022187051	70.011765	37
CGACTCC	15	0.0022187051	70.011765	29
AACGTTG	15	0.0022222775	69.98338	45
ACGTTGT	15	0.0022222775	69.98338	46
GTGGATA	15	0.0022222775	69.98338	51
GTTCAGC	15	0.0022222775	69.98338	14
TGGCGCT	30	8.34775E-6	58.31949	13
TCTTTAT	55	3.45608E-11	57.28235	1
AAAAAGG	605	0.0	57.25913	70
GTGGCGC	25	2.3854467E-4	55.986706	12
TAGTGTA	25	2.3854467E-4	55.986706	34
GCCGTAT	1210	0.0	53.810688	54
CGCCGTA	1225	0.0	53.72331	53
CGTATCA	1225	0.0	53.43755	56
CCGTATC	1220	0.0	53.36962	55
TCGCCGT	1220	0.0	53.34799	52
TCGGTGG	1255	0.0	53.254288	45
TGGTCGC	1230	0.0	53.19875	49