SRR1780091_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780091_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	65787
Sequences flagged as poor quality	0
Sequence length	76
%GC	94

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	53375	81.13305060270267	No Hit
CTTATACACATCTGACGCTGCCGACGACGATACACGTGTAGATCTCGGTG	990	1.504856582607506	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	224	0.34049280252937514	No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	123	0.18696702996032652	No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	101	0.1535257725690486	No Hit
TCTTATACACATCTGACGCTGCCGACGACGATACACGTGTAGATCTCGGT	78	0.1185644580236217	No Hit
GGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	67	0.10184382932798272	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGGTGTC	15	0.0022155612	70.00001	40
CGGGTGT	15	0.0022155612	70.00001	7
CGGCCGG	15	0.0022155612	70.00001	18
GTGTGGC	15	0.0022155612	70.00001	10
TGTCGGG	15	0.0022155612	70.00001	43
GTGTCGG	20	7.873244E-5	70.0	42
TTGTGGG	25	2.8112954E-6	70.0	2
GGTGTCG	20	7.873244E-5	70.0	41
CATTAAA	130	0.0	61.92308	61
TATCATT	130	0.0	61.92308	58
ATCATTA	130	0.0	61.92308	59
TCATTAA	130	0.0	61.92308	60
TGTGCGC	40	1.0464646E-8	61.25	3
GTATCAT	140	0.0	60.000004	57
ATTAAAA	140	0.0	60.000004	62
GTGGTCG	140	0.0	60.000004	48
GTGCGCG	35	2.932702E-7	60.000004	4
CGTATCA	135	0.0	59.629627	56
GGTCGCC	135	0.0	59.629627	50
TGGTCGC	130	0.0	59.230774	49