SRR1780071_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780071_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	161029
Sequences flagged as poor quality	0
Sequence length	76
%GC	70

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	61988	38.4949294847512	No Hit
CTTATACACATCTGACGCTGCCGACGAGCTAGAAAGTGTAGATCTCGGTG	10135	6.293897372522962	No Hit
TCTTATACACATCTGACGCTGCCGACGAGCTAGAAAGTGTAGATCTCGGT	880	0.5464854156704693	No Hit
CTCTTATACACATCTGACGCTGCCGACGAGCTAGAAAGTGTAGATCTCGG	661	0.410485067907023	No Hit
ATACACATCTGACGCTGCCGACGAGCTAGAAAGTGTAGATCTCGGTGGTC	596	0.3701196678859087	No Hit
TCTTTATACACATCTGACGCTGCCGACGAGCTAGAAAGTGTAGATCTCGG	298	0.18505983394295436	No Hit
GGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	196	0.12171720621751363	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TATGCGC	30	8.350617E-6	58.329712	3
CGACGAC	25	2.385577E-4	55.99652	22
TACACGT	25	2.385577E-4	55.99652	5
ATACACG	25	2.385577E-4	55.99652	4
AAAAAGG	1190	0.0	55.58478	70
CCGTATC	1430	0.0	54.33229	55
TCGGTGG	1495	0.0	54.31101	45
GCCGTAT	1445	0.0	54.25268	54
CTCGGTG	1480	0.0	54.152042	44
ATCTCGG	1475	0.0	54.09833	42
GGTGGTC	1490	0.0	54.040268	47
TCGCCGT	1445	0.0	54.027264	52
CGGTGGT	1490	0.0	54.02349	46
CGTATCA	1445	0.0	54.010483	56
TCTCGGT	1485	0.0	53.96971	43
TAGATCT	1480	0.0	53.91557	39
AGATCTC	1490	0.0	53.788605	40
GTCGCCG	1465	0.0	53.767628	51
TGGTCGC	1485	0.0	53.750725	49
CGCCGTA	1440	0.0	53.728626	53