FastQCFastQC Report
Wed 25 May 2016
SRR1780064_2.fastq.gz

Summary

[OK]Basic Statistics

MeasureValue
FilenameSRR1780064_2.fastq.gz
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences387
Sequences flagged as poor quality0
Sequence length76
%GC87

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per base quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG24964.34108527131784No Hit
CTTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATCTCGGTG30.7751937984496124No Hit
CTCTTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATCTCGG20.516795865633075No Hit
GTGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG20.516795865633075No Hit
GTGCATGCCACCATGCCCAGCTAATGTTTAATTTTTTTTTTTTTTTTTTT10.2583979328165375No Hit
GGTCATGAGAGTATATTGTTGAAGAGGATAGCAAATTGAAGGAAAATTTA10.2583979328165375No Hit
CTTATACAAATCTGACGCTGCCGGCGAAGGCTTAGGTGTAGATATAGGTG10.2583979328165375No Hit
ACTATAGCAGATGCGAGCAGGAGTAGGAGCTGTCTCTTATACATATCTGA10.2583979328165375No Hit
GCGGGGGGGGGGGGGGGGGGTGGGGGGGGGGCTGTGCTTGGGGTGGGGCG10.2583979328165375No Hit
CTATTACCTAAAACAATTTCACAGCACCAAATCTCCACCTCCATCATCAC10.2583979328165375No Hit
GATGTGAGAAGAAGCAGGCCGGATGTCAGAGGGGTGCCTTGGGTAACCCT10.2583979328165375No Hit
GGTTGGCAGCGGGGGGTGTGTGCGGGGGAGGGTGGGCGGGGGTCGGGCGC10.2583979328165375No Hit
CGGACGGGAGGGGCGCGGCAGAACAGGCAAACAGCGGCAACCGCCAACAA10.2583979328165375No Hit
GGGGTGAGGGTTGTGCTAATGGTCTGTAGACAGACCATGTGATCCTGCGC10.2583979328165375No Hit
GGGTGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GGCTGGGGGGGGGGGGGTTGGGGGGGGGGAGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GTGGTGCATGGAGGGAGGCGTGGTGTGTGGGTGTGTGTGGTATAGAGGGC10.2583979328165375No Hit
TTTAAGTGCTGTGGCCAGAAGCGGGGGGAGGGGGGGGCTGTCTCTTTTAC10.2583979328165375No Hit
CTATTAGAAGGATTATGGATGCGGTTGCTTGCGTGAGGAAATACTTGATG10.2583979328165375No Hit
GCCCCGTAACTGACAGATGGGCGGGCCCGCCCGCGGCCGCCGGGGGGCGG10.2583979328165375No Hit
GGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GACAGAGATAGGACAGTAAACAAATGTGAGTGAGGGTGAGAAAAACTGCT10.2583979328165375No Hit
CTCTTATACACATCTGACGCTGCCGGCGAAGGAGTAGGTGTAGATCTCGG10.2583979328165375No Hit
GTTGGGCGTGCGGGCGGGGCTAGTGGGGGAGGGGGGGGGCTGAGGGTTTC10.2583979328165375No Hit
CGGGGGGGGCGGGTTCGGGTCGGGCGGGGGGGCGGGGGGCGGGGGGGGCG10.2583979328165375No Hit
GGGGCGGGCTGCGGGCGGCCGGGCGCGCGGGGGCCCGTGAGGATGAAGGG10.2583979328165375No Hit
GGGGGTGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGG10.2583979328165375No Hit
GGAGTAGGTTTTGGTTATGTACGTAGTCGAGGCCATATGTGTGGGTGATT10.2583979328165375No Hit
TCGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
TTGTAACACGACACTGGAACATGATGATGTCTGCAGAACATATTGAGGCT10.2583979328165375No Hit
CTACAGCGAGTGAGAAGATCCCTGCTAAGGGAGGGTAGACTGTAAAACCT10.2583979328165375No Hit
CTTATACACATCTGACGCTGCCGACGAAGGCTATGGTGTAGATCTCGGTG10.2583979328165375No Hit
GGGGGGCGCCGGGTGCGGGGGGGGGGGGGGCGGGGGGGAGGGGGGGGGGG10.2583979328165375No Hit
GGGGGGGGGGGGGTGGGTGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GACAGAGATAGGACTGTAAACAAATGTGAGTGAGGGTGAGAAAAACTGCT10.2583979328165375No Hit
GAATAGCACATGACACAAAGAAGAAGCTCAGTAAAAAAAAAGATGCATGA10.2583979328165375No Hit
GATGATTGAGATGGGGGCTAGTTTTTGTCATGTGAGAAGAAGCAGGCCGG10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGTGGAGGGGGGGGGGGTGGGGGGAAGAGAGGGAG10.2583979328165375No Hit
GGAATGGTATCGTGGGTCTAAGATGTGGCTAACAGAGAAAGGTTTGTGAT10.2583979328165375No Hit
GGGGGGGGGGCGTCGGCTGGGGCGTGGCGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GGCTACTTACGGCTACGCAGCTCAAAGTGGCCAGAGGCGTAATTGGAACA10.2583979328165375No Hit
GAATCCAAACTCTAACACTATGCTTAGGCGCTATCACCACTCTGTCTGTC10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGTGGGTGGGGGGGGGG10.2583979328165375No Hit
GTGCGGGGCGGGCGCGGCCGGCGGTCGGCGGGGGGGGGGGCGCGGGGGGG10.2583979328165375No Hit
GTCGCCGGGGGTGGGGGGGGGGCGGGGGGGGGCGGGGGCGGGGGGGGGGG10.2583979328165375No Hit
GTTAGGAGGGCTCATGGTAGGGGTAAAAGGAGGGCAATTTCTAGATCAAA10.2583979328165375No Hit
GTTGGGGGGGTGTGGGGGGGGGGGGGGGGGGGTGGGGGTGGGTGGGGGGG10.2583979328165375No Hit
GACTTGAACCGCCCCATAGCCAGAGCAGGAAAGTGTTTCTGTCTCTTATA10.2583979328165375No Hit
AAGTATGTAGGAGTTGAAGATTAGTCCGCCGTAGTCGGTCTGTCTCTTAT10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGG10.2583979328165375No Hit
ATCTCTCCCTCAATAAACGTAAGCCATATCCTCACTCTCTCAATCTTATC10.2583979328165375No Hit
TTTTGGTTCTCAGGGTTTGTTATAATTTTTTATTTTTATGGGCTTTGGTG10.2583979328165375No Hit
CTTATACACATCTGACGCTGCCGACGACTCCTTACGTGTAGATCTCGGTG10.2583979328165375No Hit
GATGATAAGTGTAGAGGGAAGGTTAATGGTTGATATTGATAGGGTGGCGC10.2583979328165375No Hit
GATGTAGGAGTTGAAGATTAGTCCGCCGTAGTCGGTGTACTCGTAGGTTC10.2583979328165375No Hit
ATATGTCTCCATACCCATTACAATCTCCAGCATTCCCCCTCAAACCTAAG10.2583979328165375No Hit
GGAAGAAAGTACATCCTGTTGTCTTCTTGTCTCGATCTCAAATGTGCTCT10.2583979328165375No Hit
GGGGTAGGGGGGGGGGGGGGGGGACGCGGCAGAGTGGGGGGGTGTGGGGG10.2583979328165375No Hit
TCTTATACACAACTGACGCTGCCGACGAAGGCTTAGGTGTAGATCTCGGT10.2583979328165375No Hit
GGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGCGGGGGGGGG10.2583979328165375No Hit
CGGAGACCCGGCGGACGCGGCCGCCGCCGGCGGAGGGGGAGAGCGCGGGG10.2583979328165375No Hit
CAAAAACACAAAAAAAAAACATCTCACCCTAACAACTCAACATAACATAA10.2583979328165375No Hit
GCCCTAAGCATTCAATCATTCACTTTTTTGTTCATTAAAATTTAATGTAC10.2583979328165375No Hit
GTGGGGGGGGGGGTGGGGCGAGGGGGGGGTGGGGGGGGCGGGGGGGGGGG10.2583979328165375No Hit
GGTACTGTTTGCATTAATAAATTAAAGCTCCATAGGGTCTTCTCGTCCTG10.2583979328165375No Hit
GGGGGGGGGTGGGGGGGGCGGGCGGGGGGTGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
CTCTGGACACATGTACAAACATCCCAGGAAGAATTCAGAGGAGGAAATCT10.2583979328165375No Hit
CTAGTATCGGGGTGTGGCGGGGGGGGCGAAGGGGGGTGTGTGGGGCTGGT10.2583979328165375No Hit
TCTGGGTGGGCGGGGGGCGCGGGGGGGGGGGGGCGCGGTGGGGGGGGGGG10.2583979328165375No Hit
CTCTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATCTCGGT10.2583979328165375No Hit
CTCCTGTAGTGGTCCACTGACTCCCCCTAGGGCTCTCTATGGGGCTGTCT10.2583979328165375No Hit
CGTATAGAGATGTGGCGGGGCGGGAGGTAGGCGGTGTGGAGAGGGCGGGG10.2583979328165375No Hit
CTATTGTGTAAGCTAGTCATATTAAGTTGTTGGCTCAGGAGTCTGTCTCT10.2583979328165375No Hit
TGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GGGGGATGGGGGGGTGTGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GGGTGGGGGGGCGGGGGGGGCGGGGGGGTGGGGGGGGGGGGGGGGTGGGG10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGC10.2583979328165375No Hit
TGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
ATACACATCTGACGCTGCCGGCGAAGCCGTACGTGTAGAGCTCGGTGGTC10.2583979328165375No Hit
AAAAACAACATCAGCAGCAGACGACTAAGGAAGAGGTGATCTAAGAGGTC10.2583979328165375No Hit
ACCCTGGTAGGTGGGGAGCAGCGGACCAGCCCAAACGCTGTCTCTTATAC10.2583979328165375No Hit
CTCCTGAGTAGCTGGGACTACAGGCTCGTGCCACCATGCCCTGTCTCTTA10.2583979328165375No Hit
GCGTAAGAAGTGTATGAGGGATGACTCTTATACAGATGTGAAGCTGACGA10.2583979328165375No Hit
CAGTAGTACTCCCGATTGAGGCCCCCATTCGTATAATAATTACATCACAA10.2583979328165375No Hit
GGTGGGGCGGGTCGGCGAAATACTTAGAAGAGGGGGGGGGGGGGGAGGGT10.2583979328165375No Hit
TTCTATGGCTGAGGGGAGTAAGGGGTGGAGACCTAATTGGGCTGATTTGC10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGG10.2583979328165375No Hit
CTTAAACACATATTAAGCAGCCGGCGAAGGATTAGGTGTAGATCTAGGTG10.2583979328165375No Hit
CGCTCGTTGCTGGCGCGGTGGGCTGAGGTGGGGGTGCGAGGTGGCGGGGC10.2583979328165375No Hit
GGGGGGGGCGGGGGGGGGGGGGGCTGTGGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
CCCCTGTCTCTTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAG10.2583979328165375No Hit
CATTGCATCGAGAGCACCAGACAGAGGTTAAAAGGGTGATAGACATGTGA10.2583979328165375No Hit
GCGGTGGGGGGCGCGGTGGGGGGGGCGGGGCGGGGGGGGGGGGTGGGGGT10.2583979328165375No Hit
GGGGGGGGGCGGGGGGGGGTGGGGGGGGGGGGCGGGGGGGCGGGGGGGGG10.2583979328165375No Hit
TTACAAGGGGATTTAGAGGGTTCTGTGGGCAAATTTAAAGTTGAACTAAG10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGTGGGGGGGGGGGGGGGG10.2583979328165375No Hit
AAATTAAAGGCACATGCAGAGCAAGAAGGAAAAAAAGACATGTATCGTAT10.2583979328165375No Hit
CTTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATATCGGTG10.2583979328165375No Hit
CCTTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATCTCGGT10.2583979328165375No Hit
GCTTTGGAGAAGAGTTTTATGGAGTAAGCGAAGGGTAGAAGTAGCCCGTA10.2583979328165375No Hit
GGGTGGGTGGTGGTGGTCTGGCGGGCGGGGGGGGGGGTGGGGGGGGGGGG10.2583979328165375No Hit
GTACGATGTCTAGTGATGAGTTTGCTAATACAATGCCAGTCAGGCCACCT10.2583979328165375No Hit
CGGGGGCGCGTCTGGGGCGGGGGGCGGGGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGGGTGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
CTTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATCTCGGAG10.2583979328165375No Hit
GTGCCGGGGGGGGCCTGGGGGGGGGGGGGGGGGGGGGGGGGGGTGGGGGG10.2583979328165375No Hit
CCACTATTGTTAGGAAGAGGAAATGAATACTTCTGAAACAAGTATATTCT10.2583979328165375No Hit
GGTCAGGGTTAGGGTGGTTATAGTAGTGTGCATGGTTATTACTCTGTCTC10.2583979328165375No Hit
TATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATATCGGTGGT10.2583979328165375No Hit
CATCATCCCCACCATCATAGCCACCATCACCATCCTTAACCTCTACTTCT10.2583979328165375No Hit
AGAAAGACACACAGAATCTGCAGGCCACTAGATGAGAGAAACACTAAGTG10.2583979328165375No Hit
CCAAACACTATTCCTCATCACCCAACTAAAAATAATAAACACAAACACTC10.2583979328165375No Hit
AGGATACGGAGAGCGAGCGGCGGAGGGGGGAAGAGGGGGGGGTCGCGGAG10.2583979328165375No Hit
GGGTATGGAGAAATATAATAAAAGTAATGAAAGGGTGAGTGGTAGGAAGT10.2583979328165375No Hit
GGCGCGAGGTAGCGCGAGAAGGCGGATACGAAGGCCACCACACACAAACT10.2583979328165375No Hit
ATAATACGCCTCACACTCATTCTCAACCCCCTGACAAAACACATAGCCTA10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGG10.2583979328165375No Hit
CTCTTATACACATCTGAAGCTGCCGACGAAGGCTTAGGTGTAGATATCGG10.2583979328165375No Hit
GGTGGGGGGGGGGGGTGGGGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GACCCCCTCGAGAGCCCACAGTACCGCTCACATAACATACACCGATTAAG10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGNGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG10.2583979328165375No Hit
CAAAAACAAGTCTGAAGCTAAAGAAGCAACCAGAAGTATAAATCACATGT10.2583979328165375No Hit
GGACTTGGTATGTGCTTTCTCGTGTTACATCGCGCCATCATTGGTATATG10.2583979328165375No Hit
ACATACGAGAACACCGACTACGGCGGACTAATCTACAACTCCTACATACT10.2583979328165375No Hit
GCGGGGAGGGGGATTGGGGCGTGTGGGGGGGGGGGAGTGGGGGGGGGGGG10.2583979328165375No Hit
GCCACAACACAATGGGGATCACTCACCCACCACAATAACCTGTCTCTTAT10.2583979328165375No Hit
GGGTTATGAGAGTAGCTATAATGAACAGCGATAGTATTATTCCTTCTAGG10.2583979328165375No Hit
GATGTATGTTAGTGATATGTGCTATGAAACAAAGAAAGCAGAGTGAGTTA10.2583979328165375No Hit
AGTCCGAGTAACGTCGGGGCATTCCGGATAGGCCGAGAAAGTGTTGTGGC10.2583979328165375No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGCGGGGGGAGGGGGGGG10.2583979328165375No Hit
GGTGGGGGGGGGGGGTGGGCGGTGTGGGTGGGGGGGGGGGTGGGGGTGGG10.2583979328165375No Hit
ATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATCTCGGTGGTC10.2583979328165375No Hit
AAACGTCTCTCTGTGATGCTGTGCTTCAGCGGTCACACTCCTGTCTCTTA10.2583979328165375No Hit

[OK]Adapter Content

Adapter graph

[OK]Kmer Content

No overrepresented Kmers