SRR1780031_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1780031_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	512857
Sequences flagged as poor quality	0
Sequence length	76
%GC	48

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACAAACGGTCATCTCGTATGCCGT	15255	2.974513363374196	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	15008	2.9263517900701363	No Hit
CATATACACATCTCCGAGCCCACGAGACAAACGGTCATCTCGTATGCCGT	8667	1.6899447604302953	No Hit
TCTTATACACATCTCCGAGCCCACGAGACAAACGGTCATCTCGTATGCCG	2781	0.5422564184558268	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACAAACGGTCATCTCGTATGCC	2222	0.4332591736097976	No Hit
CACTTATACACATCTCCGAGCCCACGAGACAAACGGTCATCTCGTATGCC	787	0.15345408174208405	No Hit
CATAAACACATCTCCGAGCCCACGAGACAAACGGTCATCTCGTATGCCGT	644	0.12557106561868123	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
ACGCATG	15	0.0022244703	69.997856	58
CTAACGA	15	0.0022253306	69.99103	35
TGCCGAC	40	1.3460522E-10	69.99103	45
AGGGGGG	3120	0.0	60.1205	70
ATCGTAT	50	9.822543E-10	55.992825	39
GCCGACT	45	2.7024726E-8	54.43747	46
AAACGTT	20	0.0069373036	52.523994	29
ATATCGT	60	8.367351E-11	52.493275	37
CGAATGC	60	8.367351E-11	52.493275	41
GGGTCTA	20	0.0069533763	52.49327	1
AACGCGC	20	0.0069533763	52.49327	69
AACGAAG	20	0.0069533763	52.49327	37
CATATAC	1415	0.0	52.431446	1
CGTCTTA	235	0.0	52.12098	48
AGCCGTC	75	0.0	51.326756	45
ATATACA	1480	0.0	51.310993	2
CGTATGC	3925	0.0	51.178154	41
GCCGTCT	3340	0.0	51.131172	46
TATGCCG	3895	0.0	51.033257	43
TCTCGTA	3965	0.0	51.014896	38