SRR1779961_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779961_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	349161
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	43052	12.33012850805216	No Hit
CTTATACACATCTGACGCTGCCGACGAAGGCTTAGGTGTAGATCTCGGTG	1730	0.49547343489106743	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
AGAGTCG	15	0.002223513	70.00072	35
ACACCGT	15	0.0022247767	69.99069	6
AATATCG	20	0.006947723	52.500534	9
GGGACGT	20	0.006947723	52.500534	42
TCCACGT	20	0.006947723	52.500534	50
GGCCGGT	20	0.00695166	52.49302	7
CGCGTCT	20	0.00695166	52.49302	7
GCCGTAT	335	0.0	45.970615	54
TCGGTGG	380	0.0	45.132042	45
TCTCGGT	375	0.0	44.80046	43
TTCGTGA	55	1.3089993E-7	44.545914	22
GGTTCAC	55	1.3089993E-7	44.545914	33
TGGTCGC	370	0.0	42.568005	49
CTCGGTG	395	0.0	42.532078	44
TCGCCGT	355	0.0	42.394802	52
AGATCTC	380	0.0	42.368855	40
CGCCGTA	360	0.0	41.805984	53
ATCTCGG	390	0.0	41.282475	42
GATCTCG	390	0.0	41.282475	41
CGGTGGT	400	0.0	41.12542	46