SRR1779941_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779941_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	371995
Sequences flagged as poor quality	0
Sequence length	76
%GC	49

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACGACGCTCCATCTCGTATGCCGT	9943	2.6728853882444654	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	8996	2.418312074087017	No Hit
CATATACACATCTCCGAGCCCACGAGACGACGCTCCATCTCGTATGCCGT	5564	1.4957190284815656	No Hit
TCTTATACACATCTCCGAGCCCACGAGACGACGCTCCATCTCGTATGCCG	1787	0.4803828008440974	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACGACGCTCCATCTCGTATGCC	1672	0.4494684068334252	No Hit
CACTTATACACATCTCCGAGCCCACGAGACGACGCTCCATCTCGTATGCC	582	0.15645371577574968	No Hit
CATAAACACATCTCCGAGCCCACGAGACGACGCTCCATCTCGTATGCCGT	469	0.1260769634000457	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACGACGCTCCATCTCGTATGCC	373	0.10027016492157152	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
GGGTCTA	15	0.0022246668	69.99247	1
AGGGGGG	2285	0.0	58.97314	70
CACGAAT	30	8.374334E-6	58.32706	39
ATCGTAT	30	8.374334E-6	58.32706	39
ATATCGT	30	8.374334E-6	58.32706	37
CGAATGC	45	2.6991984E-8	54.438587	41
GCCGTCT	2645	0.0	50.9397	46
TATGCCG	2710	0.0	50.880135	43
CATATAC	895	0.0	50.832523	1
CCGTCTT	2645	0.0	50.80739	47
CGTCTTC	2660	0.0	50.652447	48
CGTATGC	2745	0.0	50.486374	41
ATGCCGT	2735	0.0	50.159138	44
TCGTATG	2780	0.0	50.102528	40
TGCCGTC	2735	0.0	50.03118	45
CCGACTT	35	2.0860543E-5	49.994625	47
GTATGCC	2780	0.0	49.72487	42
AAGGGGG	2720	0.0	49.670456	69
CTTGAAA	2680	0.0	49.62153	57
CTCGTAT	2780	0.0	49.598984	39