SRR1779922_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779922_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	357518
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	46534	13.015848153099984	No Hit
CTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGTG	5782	1.617261228805263	No Hit
ATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGTGGTC	777	0.21733171476680893	No Hit
CTCTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGG	765	0.21397524040747598	No Hit
TCTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGT	627	0.17537578527514697	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGACGTA	20	0.0069481404	52.5	53
GACGTAT	20	0.0069481404	52.5	54
GCCGTAT	1170	0.0	47.564102	54
TCGCCGT	1185	0.0	47.552742	52
CGGTGGT	1240	0.0	47.1371	46
TGGTCGC	1225	0.0	46.857143	49
CGTATCA	1210	0.0	46.570248	56
TCGGTGG	1250	0.0	46.2	45
ATCTCGG	1265	0.0	45.652176	42
CGCCGTA	1235	0.0	45.627533	53
TCTCGGT	1245	0.0	45.542168	43
CTCGGTG	1255	0.0	45.458168	44
TAGATCT	1250	0.0	45.36	39
GGTGGTC	1290	0.0	45.310074	47
AGATCTC	1275	0.0	45.294117	40
GTATCAT	1215	0.0	45.226337	57
GTGGTCG	1295	0.0	45.135136	48
GATCTCG	1280	0.0	45.117188	41
GTAGATC	1265	0.0	45.098816	38
CCGTATC	1235	0.0	45.06073	55