SRR1779919_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779919_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	183626
Sequences flagged as poor quality	0
Sequence length	76
%GC	59

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	35838	19.516844019910035	No Hit
CTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGTG	3593	1.9566945857340465	No Hit
ATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGTGGTC	497	0.2706588391622101	No Hit
TCTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGT	447	0.24342957968915077	No Hit
CTCTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGG	436	0.2374391426050777	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CTTTATA	15	0.0022219887	69.99945	2
TACCGAC	20	0.0069355206	52.513893	69
CAGTTGT	20	0.0069429977	52.499588	15
TCCACGG	20	0.0069429977	52.499588	30
TGCACTA	20	0.0069429977	52.499588	51
TATAGTC	30	5.8666593E-4	46.6663	5
GCCGTAT	625	0.0	44.799652	54
CGTATCA	640	0.0	44.296528	56
CGGTGGT	650	0.0	44.153503	46
CCGTATC	635	0.0	44.094147	55
CGCCGTA	635	0.0	44.094147	53
GTATCAT	645	0.0	43.953144	57
TGGTCGC	640	0.0	43.749657	49
TCGCCGT	635	0.0	43.54297	52
ATCTCGG	640	0.0	43.202785	42
CTCGGTG	640	0.0	43.202785	44
TCGGTGG	665	0.0	43.15756	45
GATCTCG	650	0.0	42.53813	41
AGATCTC	655	0.0	42.213413	40
CATTAAA	675	0.0	41.999672	61