SRR1779913_2.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779913_2.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	378513
Sequences flagged as poor quality	0
Sequence length	76
%GC	53

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Sequence	Count	Percentage	Possible Source
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	45255	11.955996227342258	No Hit
CTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGTG	4947	1.306956432143678	No Hit
ATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGTGGTC	641	0.16934689165233427	No Hit
TCTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGGT	505	0.1334168179164256	No Hit
CTCTTATACACATCTGACGCTGCCGACGATCTACTCTGTGTAGATCTCGG	494	0.13051070901131534	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
TGCGCTC	15	0.0022237815	69.99973	17
CGTGCGA	30	8.369469E-6	58.333115	10
GCGAGAA	35	2.084845E-5	49.999813	13
AAGAGAC	105	0.0	46.666492	5
CTTTATA	70	3.8380676E-10	44.999832	2
CCGTGCG	40	4.5890418E-5	43.749836	9
CGAGAAT	40	4.5890418E-5	43.749836	14
TCGCCGT	825	0.0	43.272564	52
GCCGTAT	830	0.0	43.011887	54
CGGTGGT	880	0.0	42.556656	46
ATCTCGG	860	0.0	42.32542	42
TGGTCGC	870	0.0	42.241222	49
GATCTCG	865	0.0	42.080765	41
CGTATCA	875	0.0	41.999844	56
TCGGTGG	880	0.0	41.761204	45
GTCGCCG	870	0.0	41.436626	51
CTCGGTG	885	0.0	41.12979	44
AGATCTC	900	0.0	40.83318	40
GTAGATC	915	0.0	40.54629	38
TCTCGGT	915	0.0	40.16378	43