SRR1779913_1.fastq.gz FastQC Report

Basic Statistics

Measure	Value
Filename	SRR1779913_1.fastq.gz
File type	Conventional base calls
Encoding	Sanger / Illumina 1.9
Total Sequences	378513
Sequences flagged as poor quality	0
Sequence length	76
%GC	47

Per base quality graph

Per base quality graph

Per Sequence quality graph

Per sequence GC content graph

N content graph

Sequence length distribution

Duplication level graph

Sequence	Count	Percentage	Possible Source
CTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	31435	8.304866675649185	No Hit
GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG	8499	2.2453654167756456	No Hit
TCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCG	3399	0.8979876516790706	No Hit
CTCTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	2711	0.7162237492503559	No Hit
ATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTCTT	1178	0.3112178445654442	No Hit
TCTTTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCC	554	0.14636221213009856	No Hit
CTAATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGT	454	0.11994304026545985	No Hit
CTATACACATCTCCGAGCCCACGAGACCCAAATAAATCTCGTATGCCGTC	431	0.11386663073659294	No Hit

Adapter graph

Kmer graph

Sequence	Count	PValue	Obs/Exp Max	Max Obs/Exp Position
CGCATGC	15	0.0022248137	69.99155	38
TACGCGG	15	0.0022248137	69.99155	5
AGGGGGG	3855	0.0	61.821323	70
CCTTATA	30	8.375275E-6	58.32629	1
ATCGTAT	30	8.375275E-6	58.32629	39
GGAATAT	25	2.390408E-4	55.993233	1
ATGTCGC	25	2.390408E-4	55.993233	37
AAGGGGG	4445	0.0	53.221916	69
TATGCCG	4635	0.0	52.55029	43
AACGGGT	20	0.00693363	52.528355	24
AAGGATC	20	0.00693363	52.528355	28
ACTGTGC	20	0.0069445116	52.50753	33
CATAGCG	20	0.006951773	52.49366	40
ATGACGA	20	0.006951773	52.49366	44
CGTCTTC	4625	0.0	52.436913	48
CGTATGC	4700	0.0	52.419197	41
TCGTATG	4715	0.0	52.400883	40
CCGTCTT	4620	0.0	52.342163	47
GCCGTCT	4635	0.0	52.32378	46
TCTTCTG	4640	0.0	52.267395	50